Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm24513-201ENSMUST00000174964 138 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm25349-201ENSMUST00000177728 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm23616-201ENSMUST00000177797 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm25871-201ENSMUST00000177816 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm24752-201ENSMUST00000178240 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm24496-201ENSMUST00000178287 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm25649-201ENSMUST00000178476 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm25548-201ENSMUST00000178681 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm23147-201ENSMUST00000178841 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm26095-201ENSMUST00000179270 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm22171-201ENSMUST00000179283 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm23936-201ENSMUST00000179354 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm22619-201ENSMUST00000179516 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm25255-201ENSMUST00000179579 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm24755-201ENSMUST00000179691 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm26506-201ENSMUST00000179692 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm25086-201ENSMUST00000179931 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm23243-201ENSMUST00000180047 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm24659-201ENSMUST00000180212 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm24169-201ENSMUST00000180244 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm23689-201ENSMUST00000180354 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm27359-201ENSMUST00000184153 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm27785-201ENSMUST00000184268 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm27466-201ENSMUST00000184396 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm27703-201ENSMUST00000184836 110 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm43474-201ENSMUST00000196415 774 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb3S4R1G7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Gm10253-201ENSMUST00000194270 940 ntBASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Gm2213-201ENSMUST00000197485 688 ntBASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Dupd1-202ENSMUST00000224735 548 ntBASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
H2afb3S4R1G7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms