Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crlf3Q9Z2L7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Gm11543-201ENSMUST00000120758 370 ntBASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Mir1895-201ENSMUST00000122615 79 ntBASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crlf3Q9Z2L7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Gm14701-201ENSMUST00000117156 348 ntBASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Crlf3Q9Z2L7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crlf3Q9Z2L7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crlf3Q9Z2L7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crlf3Q9Z2L7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crlf3Q9Z2L7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crlf3Q9Z2L7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Crlf3Q9Z2L7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crlf3Q9Z2L7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Crlf3Q9Z2L7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Crlf3Q9Z2L7 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 226.3 ms