Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Gm5745-201ENSMUST00000183748 313 ntBASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cpsf3Q9QXK7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Gm2495-201ENSMUST00000191160 466 ntBASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf3Q9QXK7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Gm15429-201ENSMUST00000151268 798 ntBASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.65□□□□□ -0.06
Cpsf3Q9QXK7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf3Q9QXK7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cpsf3Q9QXK7 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.64□□□□□ -0.07
Cpsf3Q9QXK7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Cpsf3Q9QXK7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf3Q9QXK7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf3Q9QXK7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf3Q9QXK7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms