Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm4271-201ENSMUST00000174444 973 ntBASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Gm38266-201ENSMUST00000194931 421 ntBASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Gm37008-201ENSMUST00000195712 319 ntBASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Gm26315-201ENSMUST00000083890 321 ntBASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Gm9823-201ENSMUST00000051212 327 ntBASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp8Q9DB85 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rrp8Q9DB85 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rrp8Q9DB85 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Rrp8Q9DB85 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rrp8Q9DB85 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rrp8Q9DB85 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Rrp8Q9DB85 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Rrp8Q9DB85 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Gm14723-201ENSMUST00000118686 215 ntBASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Gm29608-201ENSMUST00000190444 463 ntBASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Gm38002-201ENSMUST00000193255 180 ntBASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Gm43822-201ENSMUST00000200285 476 ntBASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Gm3961-201ENSMUST00000204425 994 ntBASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rrp8Q9DB85 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms