Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chmp2aQ9DB34 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.27□□□□□ -0.12
Chmp2aQ9DB34 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2aQ9DB34 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.27□□□□□ -0.12
Chmp2aQ9DB34 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2aQ9DB34 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2aQ9DB34 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2aQ9DB34 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2aQ9DB34 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp2aQ9DB34 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Gm2445-201ENSMUST00000182798 989 ntBASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp2aQ9DB34 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Mir698-201ENSMUST00000102164 109 ntBASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Gm22189-201ENSMUST00000103822 86 ntBASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2aQ9DB34 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Gm7488-201ENSMUST00000117148 684 ntBASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Gm6912-201ENSMUST00000117218 544 ntBASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Gm12859-201ENSMUST00000117834 427 ntBASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms