Protein–RNA interactions for Protein: Q9D9Z7

Subh2bv, Histone H2B subacrosomal variant, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Subh2bvQ9D9Z7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Subh2bvQ9D9Z7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 BC001981-202ENSMUST00000191393 1545 ntBASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.19□□□□□ -0.3
Subh2bvQ9D9Z7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Subh2bvQ9D9Z7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Subh2bvQ9D9Z7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms