Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Chaf1bQ9D0N7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Chaf1bQ9D0N7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Gm25925-201ENSMUST00000158314 306 ntBASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Gm44608-201ENSMUST00000206827 855 ntBASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chaf1bQ9D0N7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chaf1bQ9D0N7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms