Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Gm8096-201ENSMUST00000209921 1591 ntBASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Gm9385-201ENSMUST00000117563 472 ntBASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Rpph1-201ENSMUST00000175096 319 ntBASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Mir6990-201ENSMUST00000183724 91 ntBASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Gm18057-201ENSMUST00000208220 503 ntBASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Mrpl55Q9CZ83 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Mrpl55Q9CZ83 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
Mrpl55Q9CZ83 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Gm24158-201ENSMUST00000175263 71 ntBASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Gm27430-201ENSMUST00000184585 107 ntBASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Gm44333-201ENSMUST00000197168 107 ntBASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Gm43125-201ENSMUST00000201724 730 ntBASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 CT025555.1-201ENSMUST00000225901 1217 ntBASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 CT009510.1-201ENSMUST00000227972 270 ntBASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 144.3 ms