Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Gm15460-201ENSMUST00000118147 391 ntBASIC16.08■□□□□ 0.16
Smc3Q9CW03 Gm6415-201ENSMUST00000118488 348 ntBASIC16.08■□□□□ 0.16
Smc3Q9CW03 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Gm28630-201ENSMUST00000187806 498 ntBASIC16.08■□□□□ 0.16
Smc3Q9CW03 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.08■□□□□ 0.16
Smc3Q9CW03 Gm7774-201ENSMUST00000200064 533 ntBASIC16.08■□□□□ 0.16
Smc3Q9CW03 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.08■□□□□ 0.16
Smc3Q9CW03 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.08■□□□□ 0.16
Smc3Q9CW03 Gm18041-201ENSMUST00000218210 618 ntBASIC16.08■□□□□ 0.16
Smc3Q9CW03 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.08■□□□□ 0.16
Smc3Q9CW03 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc3Q9CW03 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Gm8410-201ENSMUST00000117225 605 ntBASIC16.07■□□□□ 0.16
Smc3Q9CW03 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.07■□□□□ 0.16
Smc3Q9CW03 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.07■□□□□ 0.16
Smc3Q9CW03 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.07■□□□□ 0.16
Smc3Q9CW03 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.07■□□□□ 0.16
Smc3Q9CW03 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC16.07■□□□□ 0.16
Smc3Q9CW03 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smc3Q9CW03 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.07■□□□□ 0.16
Smc3Q9CW03 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Smc3Q9CW03 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.06■□□□□ 0.16
Smc3Q9CW03 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Gm21470-201ENSMUST00000187680 696 ntBASIC16.06■□□□□ 0.16
Smc3Q9CW03 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.06■□□□□ 0.16
Smc3Q9CW03 Shd-206ENSMUST00000225145 998 ntBASIC16.06■□□□□ 0.16
Smc3Q9CW03 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.06■□□□□ 0.16
Smc3Q9CW03 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc3Q9CW03 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms