Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdk5rap3Q99LM2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdk5rap3Q99LM2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Gm10253-201ENSMUST00000194270 940 ntBASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Gm5779-201ENSMUST00000218467 910 ntBASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Cdk5rap3Q99LM2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Gm15460-201ENSMUST00000118147 391 ntBASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Mir1897-201ENSMUST00000122581 272 ntBASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Cdk5rap3Q99LM2 Gm28630-201ENSMUST00000187806 498 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms