Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Gm13369-201ENSMUST00000119442 987 ntBASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Gm27682-201ENSMUST00000183930 110 ntBASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Gm45880-201ENSMUST00000213041 853 ntBASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Gm18054-201ENSMUST00000207539 555 ntBASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 CU024892.2-201ENSMUST00000224608 832 ntBASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb5Q91XZ5 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Gm19184-201ENSMUST00000196798 928 ntBASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Gm43179-201ENSMUST00000198797 275 ntBASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Gm6013-201ENSMUST00000212264 699 ntBASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb5Q91XZ5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdhb5Q91XZ5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms