Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Gm14127-201ENSMUST00000117906 678 ntBASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Gm11918-201ENSMUST00000121660 179 ntBASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Gm5279-201ENSMUST00000199575 745 ntBASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Gm12341-201ENSMUST00000119724 503 ntBASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Gm37714-201ENSMUST00000194742 342 ntBASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Gm43438-201ENSMUST00000198133 379 ntBASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Gm17795-201ENSMUST00000214505 757 ntBASIC15.69■□□□□ 0.1
Ddx41Q91VN6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx41Q91VN6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Gm5425-201ENSMUST00000214125 459 ntBASIC15.68■□□□□ 0.1
Ddx41Q91VN6 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms