Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm27663-201ENSMUST00000184839 110 ntBASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Gm29667-201ENSMUST00000190817 490 ntBASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.18□□□□□ -0.46
Ube3dQ8BX13 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.18□□□□□ -0.46
Ube3dQ8BX13 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Gm15321-201ENSMUST00000121290 288 ntBASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ube3dQ8BX13 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.17□□□□□ -0.46
Ube3dQ8BX13 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.16□□□□□ -0.46
Ube3dQ8BX13 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Gm6916-202ENSMUST00000205523 195 ntBASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ube3dQ8BX13 Gm20445-201ENSMUST00000061905 565 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms