Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf38Q8BI21 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Gm9719-201ENSMUST00000162765 543 ntBASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Gm8396-201ENSMUST00000057361 823 ntBASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf38Q8BI21 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf38Q8BI21 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf38Q8BI21 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf38Q8BI21 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.21□□□□□ -0.3
Rnf38Q8BI21 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Rnf38Q8BI21 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf38Q8BI21 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf38Q8BI21 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf38Q8BI21 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf38Q8BI21 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.21□□□□□ -0.3
Rnf38Q8BI21 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf38Q8BI21 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rnf38Q8BI21 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm22065-201ENSMUST00000103753 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm22066-201ENSMUST00000103761 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm24932-201ENSMUST00000103763 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm24115-201ENSMUST00000103799 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm22190-201ENSMUST00000103827 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm22191-201ENSMUST00000103831 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm24721-201ENSMUST00000103849 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm28018-201ENSMUST00000103869 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm26399-201ENSMUST00000103937 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm25349-201ENSMUST00000177728 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm23616-201ENSMUST00000177797 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm25871-201ENSMUST00000177816 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm24752-201ENSMUST00000178240 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm24496-201ENSMUST00000178287 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm25649-201ENSMUST00000178476 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm25548-201ENSMUST00000178681 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm23147-201ENSMUST00000178841 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm26095-201ENSMUST00000179270 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm22171-201ENSMUST00000179283 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm23936-201ENSMUST00000179354 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm22619-201ENSMUST00000179516 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm25255-201ENSMUST00000179579 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm24755-201ENSMUST00000179691 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm26506-201ENSMUST00000179692 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm25086-201ENSMUST00000179931 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm23243-201ENSMUST00000180047 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm24659-201ENSMUST00000180212 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm24169-201ENSMUST00000180244 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm23689-201ENSMUST00000180354 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm27359-201ENSMUST00000184153 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm27785-201ENSMUST00000184268 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm27466-201ENSMUST00000184396 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm27703-201ENSMUST00000184836 110 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Gm5312-201ENSMUST00000203728 547 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms