Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.28□□□□□ -0.12
Srrm3Q80WV7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Gm25857-201ENSMUST00000082788 129 ntBASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srrm3Q80WV7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srrm3Q80WV7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srrm3Q80WV7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Srrm3Q80WV7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srrm3Q80WV7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.27□□□□□ -0.12
Srrm3Q80WV7 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.27□□□□□ -0.12
Srrm3Q80WV7 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.27□□□□□ -0.12
Srrm3Q80WV7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Srrm3Q80WV7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Srrm3Q80WV7 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.27□□□□□ -0.12
Srrm3Q80WV7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srrm3Q80WV7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Gm5177-201ENSMUST00000183092 997 ntBASIC14.27□□□□□ -0.13
Srrm3Q80WV7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srrm3Q80WV7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Gm5479-201ENSMUST00000160578 435 ntBASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.26□□□□□ -0.13
Srrm3Q80WV7 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srrm3Q80WV7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms