Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf38bQ80SY5 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf38bQ80SY5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Prpf38bQ80SY5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.33□□□□□ -0.11
Prpf38bQ80SY5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Prpf38bQ80SY5 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.33□□□□□ -0.11
Prpf38bQ80SY5 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Prpf38bQ80SY5 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf38bQ80SY5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Gm15393-201ENSMUST00000120499 219 ntBASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Gm5370-201ENSMUST00000187187 574 ntBASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Gm29127-201ENSMUST00000188304 517 ntBASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Gm7561-201ENSMUST00000211203 886 ntBASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38bQ80SY5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Gm27847-201ENSMUST00000183711 107 ntBASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Gm27375-201ENSMUST00000183799 107 ntBASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38bQ80SY5 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Gm5187-201ENSMUST00000117317 991 ntBASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms