Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Pif1Q80SX8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.65□□□□□ -0.39
Pif1Q80SX8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pif1Q80SX8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.64□□□□□ -0.39
Pif1Q80SX8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Gm15371-201ENSMUST00000117057 784 ntBASIC12.64□□□□□ -0.39
Pif1Q80SX8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.64□□□□□ -0.39
Pif1Q80SX8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Gm29649-201ENSMUST00000185649 419 ntBASIC12.64□□□□□ -0.39
Pif1Q80SX8 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.64□□□□□ -0.39
Pif1Q80SX8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.64□□□□□ -0.39
Pif1Q80SX8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pif1Q80SX8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Gm13392-201ENSMUST00000117708 150 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 Gm14660-201ENSMUST00000119809 575 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Gm8062-201ENSMUST00000139696 444 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 Snora78-201ENSMUST00000158630 128 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Gm17420-201ENSMUST00000164753 153 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 Gm38671-201ENSMUST00000200573 130 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Gm6983-201ENSMUST00000214912 628 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.63□□□□□ -0.39
Pif1Q80SX8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pif1Q80SX8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Gm43339-201ENSMUST00000200032 1606 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms