Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.19□□□□□ -0.14
Cspg5Q71M36 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg5Q71M36 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.18□□□□□ -0.14
Cspg5Q71M36 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Gm17420-201ENSMUST00000164753 153 ntBASIC14.18□□□□□ -0.14
Cspg5Q71M36 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cspg5Q71M36 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cspg5Q71M36 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
Cspg5Q71M36 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Gm13392-201ENSMUST00000117708 150 ntBASIC14.17□□□□□ -0.14
Cspg5Q71M36 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.17□□□□□ -0.14
Cspg5Q71M36 Mir1894-201ENSMUST00000122802 81 ntBASIC14.17□□□□□ -0.14
Cspg5Q71M36 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Gm27572-201ENSMUST00000183702 255 ntBASIC14.17□□□□□ -0.14
Cspg5Q71M36 Gm27486-201ENSMUST00000184923 80 ntBASIC14.17□□□□□ -0.14
Cspg5Q71M36 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg5Q71M36 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.17□□□□□ -0.14
Cspg5Q71M36 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.17□□□□□ -0.14
Cspg5Q71M36 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms