Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ParpbpQ6IRT3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ParpbpQ6IRT3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Gm15487-201ENSMUST00000122373 465 ntBASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Gm27306-201ENSMUST00000183970 107 ntBASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Mir8102-201ENSMUST00000184148 139 ntBASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Mir497b-201ENSMUST00000093601 125 ntBASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ParpbpQ6IRT3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms