Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav5d-4Q5R1F6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5d-4Q5R1F6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5d-4Q5R1F6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav5d-4Q5R1F6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Gm13223-201ENSMUST00000118609 747 ntBASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Gm13453-201ENSMUST00000118708 357 ntBASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Gm3436-201ENSMUST00000179930 840 ntBASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Gm43703-201ENSMUST00000200523 763 ntBASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav5d-4Q5R1F6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Gm8927-201ENSMUST00000181978 981 ntBASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Gm27680-201ENSMUST00000184192 160 ntBASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Gm3222-201ENSMUST00000071282 990 ntBASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav5d-4Q5R1F6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Gm12585-201ENSMUST00000117307 290 ntBASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav5d-4Q5R1F6 Gm27321-201ENSMUST00000185021 205 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms