Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp25Q3U435 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Mmp25Q3U435 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Mmp25Q3U435 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.86□□□□□ -0.35
Mmp25Q3U435 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp25Q3U435 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp25Q3U435 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp25Q3U435 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Mmp25Q3U435 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.85□□□□□ -0.35
Mmp25Q3U435 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Gm6745-201ENSMUST00000199216 526 ntBASIC12.85□□□□□ -0.35
Mmp25Q3U435 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.85□□□□□ -0.35
Mmp25Q3U435 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp25Q3U435 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Mmp25Q3U435 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Gm9794-201ENSMUST00000202370 423 ntBASIC12.84□□□□□ -0.35
Mmp25Q3U435 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.84□□□□□ -0.35
Mmp25Q3U435 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp25Q3U435 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.83□□□□□ -0.35
Mmp25Q3U435 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Mmp25Q3U435 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Mmp25Q3U435 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Mmp25Q3U435 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Mmp25Q3U435 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp25Q3U435 Gm15371-201ENSMUST00000117057 784 ntBASIC12.83□□□□□ -0.36
Mmp25Q3U435 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms