Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cul4aQ3TCH7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Chchd1-203ENSMUST00000224633 557 ntBASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cul4aQ3TCH7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Mir449b-201ENSMUST00000104833 80 ntBASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Gm15678-201ENSMUST00000117573 960 ntBASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cul4aQ3TCH7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Gm6912-201ENSMUST00000117218 544 ntBASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.34□□□□□ -0.11
Cul4aQ3TCH7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms