Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.11□□□□□ -0.47
Rab42Q0PD08 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.11□□□□□ -0.47
Rab42Q0PD08 Gm15467-201ENSMUST00000120582 445 ntBASIC12.11□□□□□ -0.47
Rab42Q0PD08 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Gm17271-201ENSMUST00000165535 355 ntBASIC12.11□□□□□ -0.47
Rab42Q0PD08 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.11□□□□□ -0.47
Rab42Q0PD08 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.11□□□□□ -0.47
Rab42Q0PD08 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab42Q0PD08 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.11□□□□□ -0.47
Rab42Q0PD08 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rab42Q0PD08 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.1□□□□□ -0.47
Rab42Q0PD08 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.1□□□□□ -0.47
Rab42Q0PD08 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Gm15427-201ENSMUST00000117288 531 ntBASIC12.1□□□□□ -0.47
Rab42Q0PD08 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.1□□□□□ -0.47
Rab42Q0PD08 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.1□□□□□ -0.47
Rab42Q0PD08 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.1□□□□□ -0.47
Rab42Q0PD08 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab42Q0PD08 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms