Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a2Q02788 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a2Q02788 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a2Q02788 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col6a2Q02788 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a2Q02788 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a2Q02788 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a2Q02788 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a2Q02788 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.64□□□□□ -0.23
Col6a2Q02788 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a2Q02788 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a2Q02788 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.63□□□□□ -0.23
Col6a2Q02788 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.63□□□□□ -0.23
Col6a2Q02788 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Col6a2Q02788 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a2Q02788 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.62□□□□□ -0.23
Col6a2Q02788 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col6a2Q02788 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.62□□□□□ -0.23
Col6a2Q02788 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Gm15770-201ENSMUST00000117498 584 ntBASIC13.62□□□□□ -0.23
Col6a2Q02788 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.62□□□□□ -0.23
Col6a2Q02788 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.62□□□□□ -0.23
Col6a2Q02788 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.62□□□□□ -0.23
Col6a2Q02788 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.62□□□□□ -0.23
Col6a2Q02788 Gm2495-201ENSMUST00000191160 466 ntBASIC13.62□□□□□ -0.23
Col6a2Q02788 Gm43433-201ENSMUST00000196573 481 ntBASIC13.62□□□□□ -0.23
Col6a2Q02788 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Gm5035-201ENSMUST00000215581 927 ntBASIC13.62□□□□□ -0.23
Col6a2Q02788 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.62□□□□□ -0.23
Col6a2Q02788 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Col6a2Q02788 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col6a2Q02788 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a2Q02788 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col6a2Q02788 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.62□□□□□ -0.23
Col6a2Q02788 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.62□□□□□ -0.23
Col6a2Q02788 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a2Q02788 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms