Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim4P70271 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.4□□□□□ -0.58
Pdlim4P70271 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim4P70271 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Pdlim4P70271 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pdlim4P70271 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.4□□□□□ -0.58
Pdlim4P70271 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim4P70271 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.4□□□□□ -0.58
Pdlim4P70271 Gm29741-201ENSMUST00000192667 421 ntBASIC11.4□□□□□ -0.58
Pdlim4P70271 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.4□□□□□ -0.58
Pdlim4P70271 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.4□□□□□ -0.58
Pdlim4P70271 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.4□□□□□ -0.58
Pdlim4P70271 Gm20445-201ENSMUST00000061905 565 ntBASIC11.4□□□□□ -0.58
Pdlim4P70271 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim4P70271 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim4P70271 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim4P70271 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pdlim4P70271 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim4P70271 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim4P70271 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim4P70271 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pdlim4P70271 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.4□□□□□ -0.59
Pdlim4P70271 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Pdlim4P70271 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdlim4P70271 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdlim4P70271 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdlim4P70271 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pdlim4P70271 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pdlim4P70271 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pdlim4P70271 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Gm14719-201ENSMUST00000121891 340 ntBASIC11.39□□□□□ -0.59
Pdlim4P70271 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pdlim4P70271 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pdlim4P70271 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Mir6977-201ENSMUST00000184960 64 ntBASIC11.39□□□□□ -0.59
Pdlim4P70271 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Pdlim4P70271 Gm10766-202ENSMUST00000194123 606 ntBASIC11.39□□□□□ -0.59
Pdlim4P70271 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.39□□□□□ -0.59
Pdlim4P70271 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.39□□□□□ -0.59
Pdlim4P70271 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.39□□□□□ -0.59
Pdlim4P70271 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.39□□□□□ -0.59
Pdlim4P70271 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.39□□□□□ -0.59
Pdlim4P70271 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pdlim4P70271 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.39□□□□□ -0.59
Pdlim4P70271 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Pdlim4P70271 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.39□□□□□ -0.59
Pdlim4P70271 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim4P70271 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pdlim4P70271 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.38□□□□□ -0.59
Pdlim4P70271 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pdlim4P70271 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.38□□□□□ -0.59
Pdlim4P70271 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Pdlim4P70271 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.38□□□□□ -0.59
Pdlim4P70271 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pdlim4P70271 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.38□□□□□ -0.59
Pdlim4P70271 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.38□□□□□ -0.59
Pdlim4P70271 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim4P70271 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms