Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm2451-201ENSMUST00000199447 999 ntBASIC12.08□□□□□ -0.48
Sec61a1P61620 Gm10290-201ENSMUST00000200451 999 ntBASIC12.08□□□□□ -0.48
Sec61a1P61620 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.08□□□□□ -0.48
Sec61a1P61620 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.08□□□□□ -0.48
Sec61a1P61620 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.08□□□□□ -0.48
Sec61a1P61620 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Sec61a1P61620 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sec61a1P61620 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sec61a1P61620 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.08□□□□□ -0.48
Sec61a1P61620 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.08□□□□□ -0.48
Sec61a1P61620 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sec61a1P61620 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sec61a1P61620 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.08□□□□□ -0.48
Sec61a1P61620 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sec61a1P61620 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sec61a1P61620 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.07□□□□□ -0.48
Sec61a1P61620 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.07□□□□□ -0.48
Sec61a1P61620 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.07□□□□□ -0.48
Sec61a1P61620 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.07□□□□□ -0.48
Sec61a1P61620 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sec61a1P61620 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.07□□□□□ -0.48
Sec61a1P61620 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.07□□□□□ -0.48
Sec61a1P61620 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sec61a1P61620 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sec61a1P61620 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.07□□□□□ -0.48
Sec61a1P61620 Gm27430-201ENSMUST00000184585 107 ntBASIC12.07□□□□□ -0.48
Sec61a1P61620 Gm29541-201ENSMUST00000191351 678 ntBASIC12.07□□□□□ -0.48
Sec61a1P61620 Gm38294-201ENSMUST00000192831 381 ntBASIC12.07□□□□□ -0.48
Sec61a1P61620 Gm44333-201ENSMUST00000197168 107 ntBASIC12.07□□□□□ -0.48
Sec61a1P61620 Olfr286-202ENSMUST00000205305 969 ntBASIC12.07□□□□□ -0.48
Sec61a1P61620 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.07□□□□□ -0.48
Sec61a1P61620 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sec61a1P61620 Rubie-203ENSMUST00000227803 2430 ntBASIC12.07□□□□□ -0.48
Sec61a1P61620 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sec61a1P61620 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sec61a1P61620 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a1P61620 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.06□□□□□ -0.48
Sec61a1P61620 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sec61a1P61620 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sec61a1P61620 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Gm9182-201ENSMUST00000217829 639 ntBASIC12.06□□□□□ -0.48
Sec61a1P61620 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.06□□□□□ -0.48
Sec61a1P61620 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sec61a1P61620 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.06□□□□□ -0.48
Sec61a1P61620 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sec61a1P61620 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.06□□□□□ -0.48
Sec61a1P61620 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.06□□□□□ -0.48
Sec61a1P61620 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.06□□□□□ -0.48
Sec61a1P61620 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Sec61a1P61620 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.06□□□□□ -0.48
Sec61a1P61620 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a1P61620 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.05□□□□□ -0.48
Sec61a1P61620 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.05□□□□□ -0.48
Sec61a1P61620 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.05□□□□□ -0.48
Sec61a1P61620 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms