Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Gm7775-201ENSMUST00000218871 853 ntBASIC13.97□□□□□ -0.17
Tubgcp3P58854 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Gm5867-201ENSMUST00000063197 592 ntBASIC13.97□□□□□ -0.17
Tubgcp3P58854 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tubgcp3P58854 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.96□□□□□ -0.17
Tubgcp3P58854 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.96□□□□□ -0.17
Tubgcp3P58854 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Gm13385-201ENSMUST00000121089 220 ntBASIC13.96□□□□□ -0.17
Tubgcp3P58854 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Gm44719-201ENSMUST00000206404 149 ntBASIC13.96□□□□□ -0.17
Tubgcp3P58854 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tubgcp3P58854 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubgcp3P58854 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Tubgcp3P58854 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubgcp3P58854 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubgcp3P58854 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Tubgcp3P58854 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tubgcp3P58854 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.95□□□□□ -0.18
Tubgcp3P58854 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.95□□□□□ -0.18
Tubgcp3P58854 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Gm4875-201ENSMUST00000118257 786 ntBASIC13.95□□□□□ -0.18
Tubgcp3P58854 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Mir6956-201ENSMUST00000183598 62 ntBASIC13.95□□□□□ -0.18
Tubgcp3P58854 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms