Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lim2P56563 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Lim2P56563 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.67□□□□□ -0.22
Lim2P56563 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.67□□□□□ -0.22
Lim2P56563 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Gm5354-201ENSMUST00000182417 973 ntBASIC13.67□□□□□ -0.22
Lim2P56563 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.67□□□□□ -0.22
Lim2P56563 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.67□□□□□ -0.22
Lim2P56563 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
Lim2P56563 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lim2P56563 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.67□□□□□ -0.22
Lim2P56563 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lim2P56563 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Lim2P56563 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lim2P56563 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.66□□□□□ -0.22
Lim2P56563 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.66□□□□□ -0.22
Lim2P56563 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.66□□□□□ -0.22
Lim2P56563 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lim2P56563 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.66□□□□□ -0.22
Lim2P56563 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lim2P56563 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lim2P56563 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.66□□□□□ -0.22
Lim2P56563 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.66□□□□□ -0.22
Lim2P56563 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.66□□□□□ -0.22
Lim2P56563 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.66□□□□□ -0.22
Lim2P56563 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.66□□□□□ -0.22
Lim2P56563 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Lim2P56563 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.66□□□□□ -0.22
Lim2P56563 Gm19220-201ENSMUST00000222682 803 ntBASIC13.66□□□□□ -0.22
Lim2P56563 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Lim2P56563 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Lim2P56563 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Lim2P56563 Grk6-205ENSMUST00000224653 2976 ntBASIC13.66□□□□□ -0.22
Lim2P56563 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lim2P56563 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Lim2P56563 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.66□□□□□ -0.22
Lim2P56563 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lim2P56563 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lim2P56563 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lim2P56563 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Lim2P56563 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lim2P56563 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.65□□□□□ -0.22
Lim2P56563 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lim2P56563 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lim2P56563 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms