Protein–RNA interactions for Protein: P50228

Cxcl5, C-X-C motif chemokine 5, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl5P50228 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.94□□□□□ -0.5
Cxcl5P50228 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.94□□□□□ -0.5
Cxcl5P50228 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.94□□□□□ -0.5
Cxcl5P50228 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Gm18737-201ENSMUST00000173594 937 ntBASIC11.94□□□□□ -0.5
Cxcl5P50228 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.94□□□□□ -0.5
Cxcl5P50228 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.94□□□□□ -0.5
Cxcl5P50228 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Cxcl5P50228 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cxcl5P50228 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cxcl5P50228 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Cxcl5P50228 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl5P50228 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cxcl5P50228 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl5P50228 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl5P50228 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Cxcl5P50228 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.93□□□□□ -0.5
Cxcl5P50228 Gm37230-201ENSMUST00000194491 818 ntBASIC11.93□□□□□ -0.5
Cxcl5P50228 Gm20553-201ENSMUST00000204205 844 ntBASIC11.93□□□□□ -0.5
Cxcl5P50228 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.93□□□□□ -0.5
Cxcl5P50228 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.93□□□□□ -0.5
Cxcl5P50228 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Gm10175-201ENSMUST00000086013 645 ntBASIC11.93□□□□□ -0.5
Cxcl5P50228 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cxcl5P50228 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.93□□□□□ -0.5
Cxcl5P50228 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl5P50228 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Cxcl5P50228 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.93□□□□□ -0.5
Cxcl5P50228 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cxcl5P50228 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl5P50228 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl5P50228 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Cxcl5P50228 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cxcl5P50228 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.92□□□□□ -0.5
Cxcl5P50228 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.92□□□□□ -0.5
Cxcl5P50228 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.92□□□□□ -0.5
Cxcl5P50228 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.92□□□□□ -0.5
Cxcl5P50228 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Rprl2-201ENSMUST00000157150 290 ntBASIC11.92□□□□□ -0.5
Cxcl5P50228 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.92□□□□□ -0.5
Cxcl5P50228 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.92□□□□□ -0.5
Cxcl5P50228 Gm18057-201ENSMUST00000208220 503 ntBASIC11.92□□□□□ -0.5
Cxcl5P50228 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Cxcl5P50228 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.92□□□□□ -0.5
Cxcl5P50228 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cxcl5P50228 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl5P50228 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms