Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cd27P41272 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd27P41272 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd27P41272 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cd27P41272 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd27P41272 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cd27P41272 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cd27P41272 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Cd27P41272 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cd27P41272 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.96□□□□□ -0.65
Cd27P41272 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.96□□□□□ -0.65
Cd27P41272 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.96□□□□□ -0.65
Cd27P41272 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cd27P41272 Gm5354-201ENSMUST00000182417 973 ntBASIC10.96□□□□□ -0.65
Cd27P41272 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Gm27772-201ENSMUST00000184900 187 ntBASIC10.96□□□□□ -0.65
Cd27P41272 Gm28631-201ENSMUST00000190740 334 ntBASIC10.96□□□□□ -0.65
Cd27P41272 Gm44719-201ENSMUST00000206404 149 ntBASIC10.96□□□□□ -0.65
Cd27P41272 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.96□□□□□ -0.65
Cd27P41272 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.96□□□□□ -0.65
Cd27P41272 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cd27P41272 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd27P41272 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cd27P41272 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cd27P41272 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cd27P41272 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cd27P41272 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Cd27P41272 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cd27P41272 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cd27P41272 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cd27P41272 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cd27P41272 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cd27P41272 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.96□□□□□ -0.66
Cd27P41272 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cd27P41272 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Cd27P41272 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cd27P41272 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.95□□□□□ -0.66
Cd27P41272 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.95□□□□□ -0.66
Cd27P41272 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Acot6-202ENSMUST00000222921 3622 ntBASIC10.95□□□□□ -0.66
Cd27P41272 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.95□□□□□ -0.66
Cd27P41272 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cd27P41272 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cd27P41272 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cd27P41272 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Gm11524-201ENSMUST00000119349 807 ntBASIC10.95□□□□□ -0.66
Cd27P41272 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.95□□□□□ -0.66
Cd27P41272 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.95□□□□□ -0.66
Cd27P41272 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.95□□□□□ -0.66
Cd27P41272 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.95□□□□□ -0.66
Cd27P41272 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cd27P41272 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd27P41272 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Cd27P41272 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms