Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm9856-201ENSMUST00000217077 2578 ntBASIC20.06■□□□□ 0.8
Chd1P40201 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd1P40201 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC20.05■□□□□ 0.8
Chd1P40201 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC20.05■□□□□ 0.8
Chd1P40201 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC20.05■□□□□ 0.8
Chd1P40201 Gm5616-201ENSMUST00000165252 384 ntBASIC20.05■□□□□ 0.8
Chd1P40201 Gm8741-201ENSMUST00000174736 384 ntBASIC20.05■□□□□ 0.8
Chd1P40201 Mir7686-201ENSMUST00000200604 57 ntBASIC20.05■□□□□ 0.8
Chd1P40201 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Gm45550-201ENSMUST00000209380 946 ntBASIC20.05■□□□□ 0.8
Chd1P40201 Gm45598-202ENSMUST00000210719 986 ntBASIC20.05■□□□□ 0.8
Chd1P40201 AC108416.1-202ENSMUST00000228927 1201 ntBASIC20.05■□□□□ 0.8
Chd1P40201 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Chd1P40201 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC20.05■□□□□ 0.8
Chd1P40201 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.05■□□□□ 0.8
Chd1P40201 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC20.05■□□□□ 0.8
Chd1P40201 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Chd1P40201 Gm13035-201ENSMUST00000117496 342 ntBASIC20.05■□□□□ 0.8
Chd1P40201 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 H2-Q3-201ENSMUST00000172583 608 ntBASIC20.05■□□□□ 0.8
Chd1P40201 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd1P40201 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC20.04■□□□□ 0.8
Chd1P40201 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd1P40201 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd1P40201 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd1P40201 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd1P40201 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd1P40201 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC20.04■□□□□ 0.8
Chd1P40201 Mup-ps26-201ENSMUST00000121751 202 ntBASIC20.04■□□□□ 0.8
Chd1P40201 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC20.04■□□□□ 0.8
Chd1P40201 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC20.04■□□□□ 0.8
Chd1P40201 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Chd1P40201 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd1P40201 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd1P40201 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd1P40201 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd1P40201 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Chd1P40201 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chd1P40201 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chd1P40201 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC20.03■□□□□ 0.8
Chd1P40201 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chd1P40201 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Chd1P40201 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chd1P40201 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chd1P40201 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC20.03■□□□□ 0.8
Chd1P40201 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC20.03■□□□□ 0.8
Chd1P40201 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chd1P40201 Mir219a-1-201ENSMUST00000083621 110 ntBASIC20.03■□□□□ 0.8
Chd1P40201 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC20.03■□□□□ 0.8
Chd1P40201 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chd1P40201 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Chd1P40201 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC20.02■□□□□ 0.8
Chd1P40201 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC20.02■□□□□ 0.8
Chd1P40201 Ighv8-10-201ENSMUST00000199579 358 ntBASIC20.02■□□□□ 0.8
Chd1P40201 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC20.02■□□□□ 0.8
Chd1P40201 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC20.02■□□□□ 0.8
Chd1P40201 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Chd1P40201 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Chd1P40201 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC20.02■□□□□ 0.8
Chd1P40201 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Chd1P40201 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Gm2673-201ENSMUST00000120958 1608 ntBASIC20.02■□□□□ 0.8
Chd1P40201 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC20.02■□□□□ 0.8
Chd1P40201 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC20.02■□□□□ 0.8
Chd1P40201 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Chd1P40201 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd1P40201 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Chd1P40201 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms