Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rab5cP35278 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rab5cP35278 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab5cP35278 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.12□□□□□ -0.63
Rab5cP35278 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rab5cP35278 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab5cP35278 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rab5cP35278 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab5cP35278 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rab5cP35278 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Rab5cP35278 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rab5cP35278 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rab5cP35278 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Rab5cP35278 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.11□□□□□ -0.63
Rab5cP35278 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.11□□□□□ -0.63
Rab5cP35278 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.11□□□□□ -0.63
Rab5cP35278 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Gm18246-201ENSMUST00000221023 728 ntBASIC11.11□□□□□ -0.63
Rab5cP35278 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.11□□□□□ -0.63
Rab5cP35278 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rab5cP35278 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.11□□□□□ -0.63
Rab5cP35278 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.11□□□□□ -0.63
Rab5cP35278 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rab5cP35278 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab5cP35278 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.1□□□□□ -0.63
Rab5cP35278 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rab5cP35278 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.1□□□□□ -0.63
Rab5cP35278 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rab5cP35278 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rab5cP35278 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.1□□□□□ -0.63
Rab5cP35278 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.1□□□□□ -0.63
Rab5cP35278 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.1□□□□□ -0.63
Rab5cP35278 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Gm44608-201ENSMUST00000206827 855 ntBASIC11.1□□□□□ -0.63
Rab5cP35278 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.1□□□□□ -0.63
Rab5cP35278 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.1□□□□□ -0.63
Rab5cP35278 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.1□□□□□ -0.63
Rab5cP35278 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.1□□□□□ -0.63
Rab5cP35278 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rab5cP35278 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Rab5cP35278 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.1□□□□□ -0.63
Rab5cP35278 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab5cP35278 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rab5cP35278 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.09□□□□□ -0.63
Rab5cP35278 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rab5cP35278 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.09□□□□□ -0.63
Rab5cP35278 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms