Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VtnP29788 Gm28631-201ENSMUST00000190740 334 ntBASIC12.4□□□□□ -0.42
VtnP29788 Gm18905-201ENSMUST00000205454 928 ntBASIC12.4□□□□□ -0.42
VtnP29788 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VtnP29788 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
VtnP29788 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VtnP29788 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VtnP29788 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VtnP29788 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VtnP29788 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VtnP29788 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VtnP29788 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VtnP29788 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VtnP29788 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VtnP29788 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
VtnP29788 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
VtnP29788 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
VtnP29788 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
VtnP29788 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
VtnP29788 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.4□□□□□ -0.43
VtnP29788 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
VtnP29788 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
VtnP29788 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VtnP29788 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VtnP29788 Gm15240-201ENSMUST00000118156 720 ntBASIC12.39□□□□□ -0.43
VtnP29788 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
VtnP29788 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.39□□□□□ -0.43
VtnP29788 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.39□□□□□ -0.43
VtnP29788 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.39□□□□□ -0.43
VtnP29788 Gm37917-201ENSMUST00000194711 392 ntBASIC12.39□□□□□ -0.43
VtnP29788 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
VtnP29788 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VtnP29788 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VtnP29788 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VtnP29788 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
VtnP29788 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.38□□□□□ -0.43
VtnP29788 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.38□□□□□ -0.43
VtnP29788 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
VtnP29788 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
VtnP29788 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.38□□□□□ -0.43
VtnP29788 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.38□□□□□ -0.43
VtnP29788 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.38□□□□□ -0.43
VtnP29788 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Gm18187-201ENSMUST00000196476 984 ntBASIC12.38□□□□□ -0.43
VtnP29788 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
VtnP29788 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.38□□□□□ -0.43
VtnP29788 Gm45384-201ENSMUST00000210451 277 ntBASIC12.38□□□□□ -0.43
VtnP29788 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.38□□□□□ -0.43
VtnP29788 Gm18624-201ENSMUST00000220966 658 ntBASIC12.38□□□□□ -0.43
VtnP29788 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.38□□□□□ -0.43
VtnP29788 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.38□□□□□ -0.43
VtnP29788 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Gm15823-201ENSMUST00000064305 670 ntBASIC12.38□□□□□ -0.43
VtnP29788 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
VtnP29788 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VtnP29788 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
VtnP29788 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms