Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nfkb1P25799 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Nfkb1P25799 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Gm11425-201ENSMUST00000119608 498 ntBASIC14.04□□□□□ -0.16
Nfkb1P25799 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Gm2445-201ENSMUST00000182798 989 ntBASIC14.04□□□□□ -0.16
Nfkb1P25799 Gm7287-201ENSMUST00000205267 602 ntBASIC14.04□□□□□ -0.16
Nfkb1P25799 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.04□□□□□ -0.16
Nfkb1P25799 Gm9396-201ENSMUST00000076703 567 ntBASIC14.04□□□□□ -0.16
Nfkb1P25799 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.04□□□□□ -0.16
Nfkb1P25799 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.04□□□□□ -0.16
Nfkb1P25799 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.04□□□□□ -0.16
Nfkb1P25799 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nfkb1P25799 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nfkb1P25799 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nfkb1P25799 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nfkb1P25799 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.03□□□□□ -0.16
Nfkb1P25799 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nfkb1P25799 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Gm12390-201ENSMUST00000117897 397 ntBASIC14.03□□□□□ -0.16
Nfkb1P25799 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.03□□□□□ -0.16
Nfkb1P25799 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.03□□□□□ -0.16
Nfkb1P25799 Gm38223-201ENSMUST00000194484 695 ntBASIC14.03□□□□□ -0.16
Nfkb1P25799 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.03□□□□□ -0.16
Nfkb1P25799 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.03□□□□□ -0.16
Nfkb1P25799 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.03□□□□□ -0.16
Nfkb1P25799 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nfkb1P25799 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nfkb1P25799 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nfkb1P25799 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nfkb1P25799 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nfkb1P25799 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Nfkb1P25799 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nfkb1P25799 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nfkb1P25799 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.02□□□□□ -0.16
Nfkb1P25799 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Nfkb1P25799 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nfkb1P25799 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nfkb1P25799 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nfkb1P25799 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nfkb1P25799 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.02□□□□□ -0.17
Nfkb1P25799 Gm15371-201ENSMUST00000117057 784 ntBASIC14.02□□□□□ -0.17
Nfkb1P25799 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.02□□□□□ -0.17
Nfkb1P25799 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
Nfkb1P25799 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nfkb1P25799 Gm27486-201ENSMUST00000184923 80 ntBASIC14.02□□□□□ -0.17
Nfkb1P25799 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nfkb1P25799 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.02□□□□□ -0.17
Nfkb1P25799 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nfkb1P25799 Gm5161-201ENSMUST00000075243 853 ntBASIC14.02□□□□□ -0.17
Nfkb1P25799 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nfkb1P25799 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nfkb1P25799 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.02□□□□□ -0.17
Nfkb1P25799 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nfkb1P25799 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nfkb1P25799 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms