Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PdgfrbP05622 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PdgfrbP05622 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.84□□□□□ -0.19
PdgfrbP05622 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.84□□□□□ -0.19
PdgfrbP05622 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PdgfrbP05622 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PdgfrbP05622 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PdgfrbP05622 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PdgfrbP05622 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PdgfrbP05622 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PdgfrbP05622 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
PdgfrbP05622 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PdgfrbP05622 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PdgfrbP05622 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.83□□□□□ -0.2
PdgfrbP05622 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PdgfrbP05622 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.83□□□□□ -0.2
PdgfrbP05622 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.83□□□□□ -0.2
PdgfrbP05622 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Gm15240-201ENSMUST00000118156 720 ntBASIC13.83□□□□□ -0.2
PdgfrbP05622 Gm24420-201ENSMUST00000176676 59 ntBASIC13.83□□□□□ -0.2
PdgfrbP05622 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.83□□□□□ -0.2
PdgfrbP05622 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.83□□□□□ -0.2
PdgfrbP05622 Gm17795-201ENSMUST00000214505 757 ntBASIC13.83□□□□□ -0.2
PdgfrbP05622 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.83□□□□□ -0.2
PdgfrbP05622 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.83□□□□□ -0.2
PdgfrbP05622 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.83□□□□□ -0.2
PdgfrbP05622 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PdgfrbP05622 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PdgfrbP05622 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
PdgfrbP05622 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
PdgfrbP05622 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PdgfrbP05622 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.82□□□□□ -0.2
PdgfrbP05622 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PdgfrbP05622 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.82□□□□□ -0.2
PdgfrbP05622 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.82□□□□□ -0.2
PdgfrbP05622 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PdgfrbP05622 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.82□□□□□ -0.2
PdgfrbP05622 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.82□□□□□ -0.2
PdgfrbP05622 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PdgfrbP05622 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PdgfrbP05622 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
PdgfrbP05622 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.82□□□□□ -0.2
PdgfrbP05622 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PdgfrbP05622 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PdgfrbP05622 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.82□□□□□ -0.2
PdgfrbP05622 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.81□□□□□ -0.2
PdgfrbP05622 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.81□□□□□ -0.2
PdgfrbP05622 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PdgfrbP05622 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms