Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.01□□□□□ -0.49
P04224 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
P04224 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04224 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Gm6159-201ENSMUST00000191249 1724 ntBASIC12□□□□□ -0.49
P04224 Gm7049-201ENSMUST00000223520 1712 ntBASIC12□□□□□ -0.49
P04224 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
P04224 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04224 Mir5131-201ENSMUST00000175426 93 ntBASIC12□□□□□ -0.49
P04224 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12□□□□□ -0.49
P04224 Gm27628-201ENSMUST00000184911 107 ntBASIC12□□□□□ -0.49
P04224 Gm10459-201ENSMUST00000202708 1155 ntBASIC12□□□□□ -0.49
P04224 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12□□□□□ -0.49
P04224 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12□□□□□ -0.49
P04224 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12□□□□□ -0.49
P04224 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12□□□□□ -0.49
P04224 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
P04224 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
P04224 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P04224 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
P04224 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P04224 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.99□□□□□ -0.49
P04224 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.99□□□□□ -0.49
P04224 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
P04224 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P04224 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.99□□□□□ -0.49
P04224 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.99□□□□□ -0.49
P04224 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.99□□□□□ -0.49
P04224 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
P04224 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
P04224 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.99□□□□□ -0.49
P04224 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.99□□□□□ -0.49
P04224 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.99□□□□□ -0.49
P04224 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P04224 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P04224 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P04224 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
P04224 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
P04224 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
P04224 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms