Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Vti1aO89116 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.75□□□□□ -0.05
Vti1aO89116 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.75□□□□□ -0.05
Vti1aO89116 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1aO89116 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Vti1aO89116 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Vti1aO89116 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.74□□□□□ -0.05
Vti1aO89116 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Vti1aO89116 Gm12742-201ENSMUST00000117326 410 ntBASIC14.74□□□□□ -0.05
Vti1aO89116 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.74□□□□□ -0.05
Vti1aO89116 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Vti1aO89116 Gm45841-201ENSMUST00000207700 164 ntBASIC14.74□□□□□ -0.05
Vti1aO89116 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Vti1aO89116 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.74□□□□□ -0.05
Vti1aO89116 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Vti1aO89116 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Vti1aO89116 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Vti1aO89116 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.74□□□□□ -0.05
Vti1aO89116 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Vti1aO89116 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.74□□□□□ -0.05
Vti1aO89116 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.74□□□□□ -0.05
Vti1aO89116 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1aO89116 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.74□□□□□ -0.05
Vti1aO89116 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vti1aO89116 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Vti1aO89116 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Vti1aO89116 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vti1aO89116 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Vti1aO89116 Gm27486-201ENSMUST00000184923 80 ntBASIC14.73□□□□□ -0.05
Vti1aO89116 Gm43094-201ENSMUST00000196549 921 ntBASIC14.73□□□□□ -0.05
Vti1aO89116 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.73□□□□□ -0.05
Vti1aO89116 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.73□□□□□ -0.05
Vti1aO89116 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.73□□□□□ -0.05
Vti1aO89116 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1aO89116 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
Vti1aO89116 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Vti1aO89116 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Vti1aO89116 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Vti1aO89116 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.72□□□□□ -0.05
Vti1aO89116 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.72□□□□□ -0.05
Vti1aO89116 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.72□□□□□ -0.05
Vti1aO89116 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.72□□□□□ -0.05
Vti1aO89116 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1aO89116 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms