Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp8O70138 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp8O70138 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp8O70138 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp8O70138 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp8O70138 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp8O70138 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp8O70138 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp8O70138 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Mmp8O70138 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp8O70138 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Mmp8O70138 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Mmp8O70138 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.63■□□□□ 0.25
Mmp8O70138 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.63■□□□□ 0.25
Mmp8O70138 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.63■□□□□ 0.25
Mmp8O70138 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.63■□□□□ 0.25
Mmp8O70138 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.63■□□□□ 0.25
Mmp8O70138 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Mmp8O70138 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp8O70138 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Mmp8O70138 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Mmp8O70138 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.62■□□□□ 0.25
Mmp8O70138 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.62■□□□□ 0.25
Mmp8O70138 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Mmp8O70138 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.62■□□□□ 0.25
Mmp8O70138 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Mmp8O70138 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Mmp8O70138 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Mmp8O70138 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.62■□□□□ 0.25
Mmp8O70138 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp8O70138 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.61■□□□□ 0.25
Mmp8O70138 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Mmp8O70138 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Gm23984-201ENSMUST00000157139 203 ntBASIC16.61■□□□□ 0.25
Mmp8O70138 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.61■□□□□ 0.25
Mmp8O70138 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Gm38144-201ENSMUST00000192790 465 ntBASIC16.61■□□□□ 0.25
Mmp8O70138 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.61■□□□□ 0.25
Mmp8O70138 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Mmp8O70138 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.61■□□□□ 0.25
Mmp8O70138 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.61■□□□□ 0.25
Mmp8O70138 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Mmp8O70138 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Mmp8O70138 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.61■□□□□ 0.25
Mmp8O70138 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp8O70138 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms