Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.53□□□□□ -0.4
Dkk1O54908 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Dkk1O54908 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Dkk1O54908 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.53□□□□□ -0.4
Dkk1O54908 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.53□□□□□ -0.4
Dkk1O54908 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Dkk1O54908 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Dkk1O54908 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Dkk1O54908 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Dkk1O54908 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Dkk1O54908 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Dkk1O54908 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.52□□□□□ -0.4
Dkk1O54908 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.52□□□□□ -0.4
Dkk1O54908 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Dkk1O54908 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Dkk1O54908 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.52□□□□□ -0.41
Dkk1O54908 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC12.52□□□□□ -0.41
Dkk1O54908 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Dkk1O54908 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.52□□□□□ -0.41
Dkk1O54908 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.52□□□□□ -0.41
Dkk1O54908 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC12.52□□□□□ -0.41
Dkk1O54908 Gm29663-201ENSMUST00000186962 853 ntBASIC12.52□□□□□ -0.41
Dkk1O54908 Gm28661-201ENSMUST00000188231 681 ntBASIC12.52□□□□□ -0.41
Dkk1O54908 Gm2707-201ENSMUST00000188979 714 ntBASIC12.52□□□□□ -0.41
Dkk1O54908 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Dkk1O54908 Gm19137-201ENSMUST00000213790 1164 ntBASIC12.52□□□□□ -0.41
Dkk1O54908 AC138284.2-201ENSMUST00000213982 567 ntBASIC12.52□□□□□ -0.41
Dkk1O54908 Gm9182-201ENSMUST00000217829 639 ntBASIC12.52□□□□□ -0.41
Dkk1O54908 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC12.52□□□□□ -0.41
Dkk1O54908 AC117656.3-205ENSMUST00000224606 1205 ntBASIC12.52□□□□□ -0.41
Dkk1O54908 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 4931417E11Rik-201ENSMUST00000070163 1095 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Dkk1O54908 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC12.52□□□□□ -0.41
Dkk1O54908 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Dkk1O54908 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.52□□□□□ -0.41
Dkk1O54908 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Dkk1O54908 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.52□□□□□ -0.41
Dkk1O54908 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Gm44843-201ENSMUST00000208320 1396 ntBASIC12.52□□□□□ -0.41
Dkk1O54908 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Dkk1O54908 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Dkk1O54908 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Dkk1O54908 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Dkk1O54908 Gm22065-201ENSMUST00000103753 110 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm22066-201ENSMUST00000103761 110 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm24932-201ENSMUST00000103763 110 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm24115-201ENSMUST00000103799 110 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm22190-201ENSMUST00000103827 110 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm22191-201ENSMUST00000103831 110 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm24721-201ENSMUST00000103849 110 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm28018-201ENSMUST00000103869 110 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm26399-201ENSMUST00000103937 110 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Dkk1O54908 Mup-ps14-201ENSMUST00000118437 532 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm23547-201ENSMUST00000158210 271 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm25349-201ENSMUST00000177728 110 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm23616-201ENSMUST00000177797 110 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm25871-201ENSMUST00000177816 110 ntBASIC12.51□□□□□ -0.41
Dkk1O54908 Gm24752-201ENSMUST00000178240 110 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms