Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.2□□□□□ -0.46
Alx4O35137 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Alx4O35137 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Alx4O35137 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.2□□□□□ -0.46
Alx4O35137 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.2□□□□□ -0.46
Alx4O35137 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.2□□□□□ -0.46
Alx4O35137 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.2□□□□□ -0.46
Alx4O35137 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.2□□□□□ -0.46
Alx4O35137 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.2□□□□□ -0.46
Alx4O35137 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.2□□□□□ -0.46
Alx4O35137 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.2□□□□□ -0.46
Alx4O35137 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Alx4O35137 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Alx4O35137 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Alx4O35137 Gm9719-201ENSMUST00000162765 543 ntBASIC12.19□□□□□ -0.46
Alx4O35137 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Alx4O35137 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.19□□□□□ -0.46
Alx4O35137 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.19□□□□□ -0.46
Alx4O35137 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.19□□□□□ -0.46
Alx4O35137 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Alx4O35137 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.19□□□□□ -0.46
Alx4O35137 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.19□□□□□ -0.46
Alx4O35137 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Alx4O35137 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Alx4O35137 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Alx4O35137 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.18□□□□□ -0.46
Alx4O35137 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Alx4O35137 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Alx4O35137 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Alx4O35137 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.18□□□□□ -0.46
Alx4O35137 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Alx4O35137 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.18□□□□□ -0.46
Alx4O35137 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Alx4O35137 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Alx4O35137 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.18□□□□□ -0.46
Alx4O35137 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Mir874-201ENSMUST00000104769 76 ntBASIC12.18□□□□□ -0.46
Alx4O35137 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Alx4O35137 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.18□□□□□ -0.46
Alx4O35137 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Gm6916-202ENSMUST00000205523 195 ntBASIC12.18□□□□□ -0.46
Alx4O35137 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.18□□□□□ -0.46
Alx4O35137 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Alx4O35137 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Alx4O35137 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Alx4O35137 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.18□□□□□ -0.46
Alx4O35137 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.18□□□□□ -0.46
Alx4O35137 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms