Protein–RNA interactions for Protein: F7BCN0

Gm28048, Predicted gene, 28048 (Fragment), mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28048F7BCN0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28048F7BCN0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Gm13823-201ENSMUST00000119930 345 ntBASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Gm14140-201ENSMUST00000119999 995 ntBASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28048F7BCN0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Gm15427-201ENSMUST00000117288 531 ntBASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Gm17971-201ENSMUST00000190239 806 ntBASIC12.6□□□□□ -0.39
Gm28048F7BCN0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.6□□□□□ -0.39
Gm28048F7BCN0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.6□□□□□ -0.39
Gm28048F7BCN0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms