Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Gm14701-201ENSMUST00000117156 348 ntBASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Gm13823-201ENSMUST00000119930 345 ntBASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Gm15693-201ENSMUST00000120470 637 ntBASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Gm18766-201ENSMUST00000189811 808 ntBASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Gm7774-201ENSMUST00000200064 533 ntBASIC13.74□□□□□ -0.21
Gm28043E0CXC2 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm28043E0CXC2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Rubie-203ENSMUST00000227803 2430 ntBASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Gm18041-201ENSMUST00000218210 618 ntBASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gm28043E0CXC2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Gm6222-201ENSMUST00000120787 396 ntBASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm28043E0CXC2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms