Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Syt7-205ENSMUST00000224135 1557 ntBASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Gm4971-201ENSMUST00000205991 1108 ntBASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Gm18934-201ENSMUST00000216671 1044 ntBASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Mir497b-201ENSMUST00000093601 125 ntBASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Gm45667-201ENSMUST00000210380 1316 ntBASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav12d-1A0N8R0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Gm5566-201ENSMUST00000116118 459 ntBASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Gm13015-201ENSMUST00000118674 204 ntBASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav12d-1A0N8R0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Gm12260-201ENSMUST00000122447 411 ntBASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Gm9824-201ENSMUST00000178707 561 ntBASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.98□□□□□ -0.65
Trav12d-1A0N8R0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms