Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Gm6550-201ENSMUST00000187574 993 ntBASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pfdn5Q9WU28 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pfdn5Q9WU28 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Gm15173-201ENSMUST00000122049 433 ntBASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn5Q9WU28 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms