Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Gm18766-201ENSMUST00000189811 808 ntBASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.35■□□□□ 0.05
Chaf1aQ9QWF0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 AA543401-201ENSMUST00000164248 1269 ntBASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Gm43474-201ENSMUST00000196415 774 ntBASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1aQ9QWF0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chaf1aQ9QWF0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chaf1aQ9QWF0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chaf1aQ9QWF0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Chaf1aQ9QWF0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chaf1aQ9QWF0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.33■□□□□ 0.05
Chaf1aQ9QWF0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
Chaf1aQ9QWF0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Gm9824-201ENSMUST00000178707 561 ntBASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Gm27702-201ENSMUST00000184512 56 ntBASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Gm44608-201ENSMUST00000206827 855 ntBASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.33■□□□□ 0.04
Chaf1aQ9QWF0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1aQ9QWF0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms