Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Gm28631-201ENSMUST00000190740 334 ntBASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdc40Q9DC48 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Gm15460-201ENSMUST00000118147 391 ntBASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Gm10766-202ENSMUST00000194123 606 ntBASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Gm37917-201ENSMUST00000194711 392 ntBASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Gm6180-201ENSMUST00000065243 498 ntBASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdc40Q9DC48 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.72□□□□□ -0.37
Cdc40Q9DC48 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.72□□□□□ -0.37
Cdc40Q9DC48 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdc40Q9DC48 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms