Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Mir497b-201ENSMUST00000093601 125 ntBASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Gm14494-201ENSMUST00000118786 435 ntBASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Gm10305-201ENSMUST00000195331 2475 ntBASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp5Q9D7S9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp5Q9D7S9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.09■□□□□ 0.33
Chmp5Q9D7S9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms