Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.58□□□□□ -0.4
Rita1Q9D1H0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Gm8463-201ENSMUST00000208573 613 ntBASIC12.58□□□□□ -0.4
Rita1Q9D1H0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.58□□□□□ -0.4
Rita1Q9D1H0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Gm5035-201ENSMUST00000215581 927 ntBASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Gm5186-201ENSMUST00000218781 920 ntBASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.57□□□□□ -0.4
Rita1Q9D1H0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rita1Q9D1H0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Gm11478-201ENSMUST00000117851 599 ntBASIC12.56□□□□□ -0.4
Rita1Q9D1H0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.56□□□□□ -0.4
Rita1Q9D1H0 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rita1Q9D1H0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms