Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.63□□□□□ -0.23
Trim33Q99PP7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim33Q99PP7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.63□□□□□ -0.23
Trim33Q99PP7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Gm21470-201ENSMUST00000187680 696 ntBASIC13.63□□□□□ -0.23
Trim33Q99PP7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Trim33Q99PP7 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.63□□□□□ -0.23
Trim33Q99PP7 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.63□□□□□ -0.23
Trim33Q99PP7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.63□□□□□ -0.23
Trim33Q99PP7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.63□□□□□ -0.23
Trim33Q99PP7 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.63□□□□□ -0.23
Trim33Q99PP7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim33Q99PP7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.63□□□□□ -0.23
Trim33Q99PP7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim33Q99PP7 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.62□□□□□ -0.23
Trim33Q99PP7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Gm15487-201ENSMUST00000122373 465 ntBASIC13.62□□□□□ -0.23
Trim33Q99PP7 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.62□□□□□ -0.23
Trim33Q99PP7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim33Q99PP7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.61□□□□□ -0.23
Trim33Q99PP7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Gm12585-201ENSMUST00000117307 290 ntBASIC13.61□□□□□ -0.23
Trim33Q99PP7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.61□□□□□ -0.23
Trim33Q99PP7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim33Q99PP7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms