Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Gm29741-201ENSMUST00000192667 421 ntBASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Gm22189-201ENSMUST00000103822 86 ntBASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Gm28760-201ENSMUST00000185995 736 ntBASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Gm2423-201ENSMUST00000074863 733 ntBASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha3Q91Y16 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Gm6912-201ENSMUST00000117218 544 ntBASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Mir497b-201ENSMUST00000093601 125 ntBASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdha3Q91Y16 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms